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Biology Department Graduate Emphasis
in


MICROBIOLOGY

 

The Microbiology core curriculum is appropriate for graduate students who wish to specialize in areas of biology that study the various processes that occur in microbes (bacteria, viruses, fungi and protists) such as their physiology, ecology, development or evolution.

Master degree seeking students are expected to choose three, 400-level courses and at least two 500 or 600-level courses to fulfill the microbiology emphasis.  PhD degree seeking students are expected to choose two 400-level courses, 2-500 level courses, and 1-600 level course.  Presentation of at least one formal seminar (i.e., an Exit Seminar) is expected.  Other courses from other disciplines (Ecology/Evolution or Cell/Organismal) can be substituted for these courses, depending on the direction of the thesis project and input from the committee.

 

Participating Faculty in Biology (click on picture for personal website)

 

Dr. James "Skip" Botsford

jbotsfor@nmsu.edu

Osmotic stress in microbes

 
  Dr. Angus Dawe

dawe@nmsu.edu

Molecular biology of fungi

Dr. John Gustafson

jgustafs@nmsu.edu

Antibiotic resistance of bacterial pathogens

 
  Dr. Kathryn A. Hanley

khanley@nmsu.edu

Emergence, evolution and epidemiology of flaviviruses

Dr. Michele K. Nishiguchi

nish@nmsu.edu

Evolutionary biology of marine symbiosis

 
  Dr. Michèle Shuster

mshuster@nmsu.edu

Science Education

Dr. Geoffrey B. Smith

gsmith@nmsu.edu

Environmental microbiology

 

 

Graduate Students (click on name to contact)


With Dr. Dawe:

Jeremy D. Jonas

Rong Mu (Mol Bio)

Gloricelys Rivera

Joanna Salamon-Kozubowska

 

With Dr. Gustafson:

Alejandro Delgado Ramos

JoAnne Dupre

Reena Lamichhane-Khadka

 

With Dr. Hanley:

Dr. Kim Pepin (Postdoctoral)

Nyree Maes

Swati Mukherjee

Tammy Romero

Ebenezer Tumban

 

With Dr. Nishiguchi:

Don Sanjiv Ariyakumar

Wendy Castle

Ricardo Guerrero-Ferreira

Schery Umanzor-Rodriguez

Will Soto

Daniel J. Zamborsky

 

With Dr. Shuster:

Jennifer Sitton

 

With Dr. Smith:

Franklin Besong

Alba Chavez

Amy E. F. Lopez

David Johnson

Jaya Vaanishree Rao

Guadalupe Vidal

 

Degree requirements for Biology with an emphasis in Microbiology

Ph.D. in Biology  M.S., Thesis option  M.S., non-Thesis option

 

Microbiology Course Offerings

 

450 and above
BIO 451  Physiology of Microorganisms  3 cr
BIO 472  Mycology 3 cr
BIO 473 Ecology of Microorganisms 4 cr
BIO 474 Immunology 3 cr
BIO 475 Virology 3 cr
BIO 477 Applied and Environmental Microbiology 4cr
BIO 478 Molecular Biology of Microorganisms 3 cr
BIO 479 Medical Microbiology 3 cr
BIO 479L Medical Microbiology Lab 1 cr
BIO 482 Microbial Systematics 2 cr
EPWS 482 Parisitology 3 cr
EPWS 462L Parisitology Laboratory 1 cr
HLS 450  Epidemiology 3 cr
 
500 and above
BIO 520  Molecular Cell Biology 3 cr
BIO 521 Topics in Advanced Microbial Physiology 3 cr
BIO 522 Mechanisms of Fungal Pathogenesis 3 cr
BIO523 Mechanisms of Bacterial Pathogenesis 3 cr
BIO524 Mechanisms of Viral Pathogenesis 3 cr
BIO525 Emerging Diseases 3 cr
BIO526 Symbiosis 3 cr
BIO 540 Ethical issues in the Biological Sciences 1-3 cr
BIO 541 Professional Development Seminar 1-3 cr
BCHE 542 Biochemistry I 3 cr
BIO 545/BCHE 545 Molecular and Biochemical Genetics 3 cr
BCHE 546 Biochemistry II  3 cr
BIO 577 Advanced Topics in Environmental Microbiology 3 cr
     
600 and above
BIO 612 Microbiology Seminar 1-3 cr
BIO 620 Advanced Studies in Microbial Physiology  1-3 cr
BIO 634 Advanced Studies in Medical Microbiology 1-3 cr
BIO 639 Advanced Studies in Soil Microbiology 1-3 cr

                                                          

Graduate Student links and info

NMSU Biology Department
NMSU Graduate School
International Students Program
 

Biology Graduate Student Organization: Advice for entering grad students - from grad students!

 

Funding opportunities
 NMSU Link Fellowships and Grants
 Fastweb Scholarships for Students
 MBRS RISE program

 

Journal Articles

http://www.jstor.org/

http://www.blackwell-synergy.com/

http://www.fems-microbiology.org/website/nl/default.asp

http://www.springerlink.com/home/main.mpx

http://www.tigr.org/publications/

http://www3.interscience.wiley.com/browse/?type=JOURNAL

http://www.pubs.royalsoc.ac.uk/index.cfm?page=1000

http://highwire.stanford.edu/

 

Instrumentation and Resources

There are many departmental and university  facilities that support laboratory research efforts at New Mexico State University. The following are of particular relevance for the Microbiology Core.

 

Electron Microscopy Laboratory : NMSU Main Campus, Skeen Hall, Room W152

  • Hitachi H7650 120 kV biological Transmission Electron Microscope
  • Hitachi S3400-n Variable Pressure Scanning Electron Microscope (SEM), with Thermo Electron System 6EDS
  • Hitachi TM1000 Table top SEM
  • Zeiss Axioplan Optical Microscope
  • LKB Ultrotome III Ultramicrotome
  • Leica UC6 Ultramicrotome
  • B-4 Porter-Blum Microtome
  • Denton vacuum turbo sputter coater with carbon coating
    Ancillary Equipment

 

Fluorescence Imaging Facility: NMSU Main Campus, Skeen Hall, Room W156

  • Bio-Rad MRC 1024 ES laser scanning confocal imaging system attached to an Olympus BX-50 microscope.
    • Krypton/argon laser with three excitation lines


Genetic Analysis Facility: NMSU Main Campus, Foster Hall, Room 228

  • ABI Prism 3100 ABI Genetic Analyzer

 

Laboratory of Ecological Chemistry: NMSU Main Campus, Foster Hall, Room 257

  • Isotope Ratio Mass Spectrophotometer
  • Delta Plus XP in continuous flow with EA or TC/EA
  • Waters liquid chromatography MS
  • Elemental analyzers
  • Gas chromatography
  • Flow injection analyses ion chromatography

 

Societies and Special Conferences

American Society for Microbiology

American Society for Virology

American Association of Immunologists (AAI)

American Society of Tropical Medicine and Hygiene (ASTMH)

Federation of American Societies for Experimental Biology (FASEB)

International Society for Microbial Ecology (ISME)

International Symbiosis Society (ISS)

Rio Grande Branch of the American Society for Microbiology

Scholarship of Teaching and Learning (SOTL)

Society for the Study of Evolution (SSE)

Society of Integrative and Comparative Biology (SICB)