cpDNA MATRIX IN HENNIG
FORMAT
Save this page as text and use only the matrix below
in WinClada or Paup.
The character activity and names specified at the end of the matrix will
only be functional in WinClada.
xread
'Hughes et al. cpDNA'134 60
Desmanthus_fruticosus
001???10000000000000???????0000100100001000000010?????????????????000110011??000000??0000001???00000010000000011???????????110????????
L._greggii
0110001100000100000001000100010010?0000101000101000100000????0??00000110000??010000000000100000000001000000011000100000101000100001101
L._cuspidata-2
001???10000001000000???????000100000000100000000000001000000000000000110000000000000000000000000000000000000?00001000000010000????0001
L._cuspidata-3
001???10000001000000???????00010010000010000000001000000000000????00011001100000000000000000000000000000000000000100000????000????0001
L._cuspidata-1
001???10000001000000???????00110000000010000000001000000000000????0000001??00000000000000000000000000000000000000100000????000????0001
L._diversifolia-10
00000010000001100000???????001000010000100000000000001001000100000000101011001011001100000100011000000001011000000011000000001????0001
L._diversifolia-6
000???10000001100000???????00??????0000100000000000001001000100000000101011001011001100000100011000000001011?00000011000000001????0001
L._diversifolia_1,2,3,4,5,9
000???10000001100000???????00100001000010000000000100100100010????00010101100101100110000010001100000010000000000001100????001????0001
L._diversifolia-7
00000000000001100000???????001000010000100000000000001001000100000000101011001011001100000100011000000001011000000011000000001????0001
L._esculenta-1
000???10000000010000???????000100000000000000000000001000?????0000000110010100010100000000000100000000000100?00001000001011000????0001
L._esculenta-2
00100010000000010000???????000100000000000000000000001000000010000000110010101010100000000000100000000000100000001000001011000????0001
L._involucrata
001???10000000000100???????000100000000000000000000001000000010000000110011000010100000000000100000000000100?00001000001011000????0001
L._lanceolata_ssp._lanceolata-3
001001000000000000000000000000000010000000000010000010000010000001000000000??000000000000000000000000000000000000100000101000010000000
L._lanceolata_ssp._lanceolata-4
001001000010000000000000000000000010000000000010000010000100000001000000000??000000000010000000000000000000000000010000101000001000000
L._lanceolata_ssp._lanceolata-1
001???00000000000000???????000000010000000000010000010000000000001000000000010000000000000000000000000000000?00001000001010000????0000
L._lanceolata_ssp._sousae-2
101000000000000000000010010000000010000000000010000000000?00000001000000000??000000000010000000000100000000000000100000101000000100000
L._lanceolata_ssp._sousae-1
10100000000000000000001001000?00?0?0000000000010000000000000000001000000000??000000000000000000000100000000000000100000101000000100000
L._lempirana-1
101???00000000000000???????000000000000000000000000000000000000000000000000010000000000000000000000000000000?00001000001010000????0000
L._lempirana-2
101???00000000000000???????000000000000000000000000000000000000010000000000010000000000000000000000000000000?00001000001010000????0000
L._leucocephala_ssp._gla-1,2,4,5,7,8,13_&_leuco-1,4
000???10000001100000???????00101010000010000000000000101010000????00010101100101100110000010100100000010000000000000110????001????0001
L._leuco_ssp.__glab-3,6,9,10,11,12,15,17_&_ixtah-2_&_leuco-2,3
000???10000001100000???????001010100000100000000000001010100000100000101011001011001100000101001000000100000?00000001100000001????0001
L._leucocephala_ssp._ixtahuacana-1
000???10000001100001???????1110100000011000000000?????????????????001101011??101100??0000010???10000001000000000???????????001????????
L._macrophylla_ssp._macrophylla
??1???????????000000???????000000001100010010000000000000000000000000000000??000000001000000000000000000000000000010000101000000010000
L._macrophylla_ssp._istmensis-1
001100000000000000000000001000000011100010010000000000000001000000000000000??000000001010000000000000000000000000010000101000010000000
L._macrophylla_ssp._istmensis-2
001100000000000000000000001000000001100010010000000000000001000000000000000??000000001010000000000000000000000000010000101000010000000
L._magnifica-2
001000000000000000000000010000000010000000000000000000000100000100000000000??000000000001000000010000000000000000100000101000010000000
L._magnifica-1
001000000000000000000000010000000010000000000000000000000010000100000000000??000000000001000000010000000000000000100000101000010000000
L._matudae
00100000000000010000???????001000000000000000000000001000???????00000110001000010010000000000100000000010010000000000001011000????0001
L._multicapitula-2
0010000000010000000000100010000000?0000000100000000000000????00000000000000??000000000010000000000010000000000000000001101000000010010
L._multicapitula-1
001000000000100000000001001000000010000000100000000000000????00000000000000??000000000000000000100000000000000000000001101000000010010
L._pallida-2,_4
001???10000000001000???????00010000000000000000000000100000001????00011001100001010000000000010000000000010000000100000????000????0001
L._pallida-3
001???10000000001000???????00010000000000000000000000000000001????00011001100001010000000000010000000000010000000100000????000????0001
L._pallida-1
001???10000000001000???????000100000000000000000000001000000010000000110011000010100000000000100000000000100?00001000001011000????0001
L._pueblana-2
00100010000000001000???????000100000000000000000000001000000010000000110011001010100000000000100000000000100000001000001011000????0001
L._pueblana-1
001???10000000001000???????000100000000000000000000001000000010000000110011001010100000000000100000000000100000001000001011000????0001
L._pulverulenta-2,4,6
00000010000001100000???????001010100000100000000000001010100000000000101011001010101100000101001000000100000000000001100000001????0001
L._retusa
001010111100000000001010100001001000010101000001000100100100001000000110000??010000000100000000001000000000001000000000101000100000001
L._salvadorensis-4
001???00001000000000???????000000000000001000000100000000000000001010000000010000000000000000000000000000000?00001000001010000????0000
L._salvadorensis-3
001000000010000000000010000000000010000000100000100000000????00001000000000??000000000000000000000000000000000000100000101000000010010
L._salvadorensis-1
001000000010000000000010000000000000000000100000100000000????00001000000000??000000000000000000000000000000000000100000101000000010010
L._salvadorensis-2
001???00001000000000???????000000000000001000000100000000000000001000000000010000000000000000000000000000000?00001000001010000????0000
L._salvadorensis-5
001???00001000000000???????000000000000001000000100000000000000001010000000010000000000000000000000000000000?00011000001010000????0000
L._shannonii-2,3,5,6
001???00000000000000???????000000010000000000000000000000000000100000000000010000000000000000000100000000000?00001000001010000????0000
L._shannonii-1
001000000000000000001000000000000000000000000000000000000010000100000000000??000000000000000000010000000000000000100000101000010000000
L._trichandra-3
001???00000000000000???????00000000000000000000000000000000000????00000000001000000000000000000010000000000000000100000????000????0000
L._trichandra-1,2,6
001???00000000000000???????00000000000000000000000000000000000????00000000001000000000000000000000000000000000000100000????000????0000
L._trichandra-8,12
001???00000000000000???????000000000000000000000000000000000000000000000000010000000000000000000100000000000?00001000001010000????0000
L._trichandra-7
001???00000000000000???????000000000000000000000000010000000000000100000000010000000000000000000000000000000?00001000001010000????0000
L._trichodes-1
101000000000000000000010001000000010000000000000000000000????00000000000010??000000000000000000000000000000000001010000101000000000000
L._trichodes-2
001100000000000000000000001000000010000000000000000000000000000000000000010??000000000000000000000000000000000001010000101000000000000
Schlienitzia_novoguieensis
101???10000000000010???????1100100100010000000010?????????????????001110011??000000?????????????????????????0000???????????100????????
L._leucocephala_ssp._glabrata-14,16
00000010000001100000???????001010100000100000000000001010100000100000101011001011001100000101001000000100000000000001100000001????0001
L._trichandra-9,10,11
001???00000000000000???????0000000100000000000000?????????????????000000000??000000??0000000???01000000000000000???????????000????????
L._trichandra-5
0010000????????00000???????000000000000000000000000000000000000100000000000010000000000000000000000000000000000001000001010000????0000
L._collinsii_ssp._collinsii-1,2
00100000000000000000???????000000000000000000000000000000000000100000000000010000000000000000000100000000000000001000001010000????0000
L._collinsii_ssp._zacapana-2
??1000?0000000000000???????000000000000000000000000000000000000100000000000010000000000000000000000000000000000001000001010000????0000
L._collinsii_ssp._zacapana_1,_3__&_L._trichandra-4
00100000000000000000???????000000000000000000000000000000000000100000000000010000000000000000000000000000000000001000001010000????0000
L._lanceolata_ssp._lanceolata-2,5
001???00000000000000???????0000000100000000000000?????????????????000000000??000000??0000000???00000000000000000???????????000????????
L._confert_ssp._adeno-1,3_&_confert-1
001???10000000000000???????00100000000000000000000000000000000????00000000001000000000000000000000000000000000000100000????000????0000
_L._confertiflora_ssp._adenotheloidea-1
001???00000000000000???????0010000000000000000000?????????????????000000000??000000??0000000???00000000000000000???????????000????????
;
cc - 0.133;
cc ] 1 4 8.9 11.12 17.19 21 23.24 37 44.45 50
54 62 64 66 72 82 86 89 91 97 99.101 103 108 110.111 120 124 127 130.131;
proc /;
optcode u 0.133;
;